Welcome to the Protein Data Bank Electron Density Analysis (pdb-eda) documentation!

Contents:

• User Guide
  • Description
  • Citation
  • Installation
    • Install on Linux, Mac OS X
    • GitHub Package installation
    • Dependencies
  • Basic usage
  • CHANGELOG
  • License
• The pdb_eda Tutorial
  • Using pdb_eda as a library
    • Importing pdb_eda package
    • Constructing densityAnalysis instance
    • Accessing the PDB data
    • Accessing the CCP4 data
    • Analyzing the electron density data
  • Using pdb_eda in the command-line interface
• The pdb_eda API Reference
  • Electron Density Analysis
    • PDB Electron Density Analysis (pdb_eda.densityAnalysis)
  • CCP4 Parser
    • CCP4 Parser (pdb_eda.ccp4)
  • PDB Parser
    • PDB Parser (pdb_eda.pdbParser)
  • Crystal Contacts Analysis
  • Utilities
    • Utilities (pdb_eda.utils)
  • File Utilities
    • File Utilities (pdb_eda.fileUtils)

Indices and tables

• Index
• Module Index
• Search Page